Instructions

• To train prediction model, following the steps:
  • ${\rm\color{blue}{S1_generate_spectrum.py}}$
    • Generate ${\rm\mu_s}$ spectra from the A, K fitted factor from literatures.
    • Generate ${\rm\mu_a}$ spectra in the range of literatures.
  • ${\rm\color{blue}{absoprtion_spectrum_by_substance/make_spectrum.ipynb}}$
    • Generate ${\rm\mu_a}$ spectra based on the chromophores such as water, blood, subcutaneous, collagen and melanin.
    • copy the result files skin_mua_spectrum.csv, fat_mua_spectrum.csv, muscle_mua_spectrum and cca_mua_spectrum.csv to the directory prediction_model/OPs_used/mua_chromophore
  • ${\rm\color{blue}{S2_generate_surrogate_result.py}}$
  • ${\rm\color{blue}{S3_generate_prediction_input.py}}$
  • ${\rm\color{blue}{S4_train_prediction_model.py}}$